Category: University of Washington, School of Oceanography Page 5 of 7

Week 9

After my brief stint on the R/V Rachel Carson, I catch a flight to the East coast and arrive in Woodshole to meet UW’s larger ship, the R/V Thomas G Thompson. The boat is docked all the way at the end of town, but I can see the mast towering high above the buildings as I walk down the street. This small, coastal town is a major hub for Oceanography, and essentially is built around and consists of the Woodshole Oceanographic Institution. I can overhear people discussing their research while walking down the street. There are flyers for a plankton exhibit taped on store fronts. Everyone sports shades of blue. 

The Thompson is enormous. It can house about thirty crew and thirty scientists. There are four different science labs, a library, a lounge, a gym. It is much larger and more stable than any other ship I have ever sailed on. When we leave the dock, there are no sudden movements or strange noises. So, it’s only when I look up and out the porthole and see the masts of other ships going by that I realize we are underway. Out we go, to the continental shelf!

About one hundred miles off the coast of New England, the oceanic plate dives under the continental plate, resulting in a sudden drop from relatively shallow coastal shelf to deep ocean. The Gulf Stream runs northward along this boundary, and every so often, the inner edge of the stream catches and peels off in massive eddies. In the main lab across the passageway, a satellite image is displayed on the projector screen. Shades of the rainbow illustrate where the warm water from the Gulf brushes against the cold, nutrient-rich shelf water. To the south of Woodshole is a massive swirl of red that is unmatched in size by any other feature on the screen. A warm core eddy. By its side is a bright blue ribbon that snakes out into the open ocean. The scientists point and call it the streamer.

Although this whole region has been widely sampled and studied, scientists have yet to thoroughly examine and quantify the streamer itself. The science party on board is an interdisciplinary group, made up of labs all over the country. They have come together to seek out this streamer and learn everything they can about it. To do this, they have brought an arsenal of instruments on board with them. As one of the technicians, one of the largest aspects of the job is to assist in the safe deployment and recovery of these instruments. My first deployment on board is with the Video Plankton Recorder (VPR) which looks like a small black fixed-wing plane. In its nose is a strobe light and in the starboard wing is a camera, so as the instrument is towed behind the ship, it takes images of an area the size of a cubic centimeter. It essentially acts as an underwater microscope, which can communicate a live feed of images to us up in the lab as it “flies” through the water. On board is also one of the Remote Environment Monitoring UnitS (REMUS) from the Woodshole Institution of Oceanography. This robot comes with its own team of technicians that are responsible for programming, communicating, and troubleshooting REMUS. Although it looks like a glider, REMUS has a propeller on its tail, which gives it greater control over its movement and a greater range of travel throughout its mission. The deployment is a bit more complicated, since the robot will be free floating, we lift the 700 lb REMUS up into the air with our crane, then slowly lead it overboard and out into the water. As it hit the surface of the water, we pull a line that releases a pin mechanism on the bridle of the instrument, and the robot is free. 

During our cruise, REMUS unexpectedly aborted one of its missions. Communication with the instrument while it is underwater is limited to echo sounding, which only works when the instrument is within range. To “talk” to REMUS while it is close by, but underwater, the team has a hand-held transducer that can be lowered just over the rail and into the water. There are a variety of commands that can be communicated through a series of clicks. Judson holds the transducer up to my ear and sets the dial to “Abort”. I hear it crisp and clear; click, click, click-click-click. He sets the dial to the next setting “Run”. Click, click, click-click-click. I can’t tell the difference at all. Judson is all smiles. Clearly excited, he explains that the commands may all sound the same to the human ear, but REMUS can differentiate between them and respond accordingly. However, when the robot aborted its mission, the transducer wasn’t even in the water. By some sort of miracle, that exact series of clicks was generated by something somewhere out in the ocean, and REMUS heard. 

When the data from all of the instruments and sensors are combined, we are able to see the ocean in a rare and beautiful light. Instead of just a satellite surface layer image, the screen now flashes through 3D graphics of the streamer with red and blue and green swirls indicating temperature fronts, high and low salinity, blooms of phytoplankton, areas with oxygen, areas without. To the average person, this swath of sea would appear desolate and lifeless. Perhaps a few would notice amber fronds of sargassum floating by; maybe others would spot a storm petrel riding the high pressure wind under the crest of a wave. But for the most part, the North Atlantic, to the naked eye, is an endless blue desert. So if you are lucky enough to tag along with group of thirty oceanographers at sea, do not hesitate, for they will reveal to you a world that is teeming with diversity and incredible forms of life.

 

Week 7

We have reached the final station of the cruise. Our plan is to sit tight and sample here for the next day or so, then make our way back to Seattle. With only a few days to go, the chief scientist loses his balance during a roll and tumbles headfirst into the steel doorway of the ship. Todd sees him take the fall and is by his side in an instant. We head for shore.

We all sit around the galley, John in the corner with a towel pressed on his wound, and trade head injury stories to pass the time. Turns out, every decade or so, John hits his head. It’s been fifteen years since the last one, so he laughs and says he was overdue. The guy has had dozens of staples in his head, and by the end of the day, he will have nine more.

After an injury occurs, there is a twelve hour window for stitches. We are due in Neah Bay at 0200, leaving just four hours to get John to the nearest hospital. It takes the whole team, both on shore and at sea, to make arrangements to dock in Neah Bay, get a shoreside crew member to drive from Seattle to the peninsula to pick John up at the dock, make the bumpy back road drive to Port Angeles, find a hospital, seek treatment, get breakfast, and get John back on board at 0900. By some miracle, it all comes together, and we are off again.

Our last day on board is spent navigating among the San Juan Islands. The water is clear and green as sea glass. We glide past cliff sides covered in evergreens above and mussels below. With the underway pumping system chugging away on its own, the entire crew and science party are out on deck, taking in the smooth seas and sunlight. At slack tide we make it to Deception Pass, Todd tells me of the insane currents he has encountered here, and of the time he once flooded a fishing boat trying to make it through at the wrong tide. But the water is calm enough right now, and as we coast along we wave to the onlookers standing on the bridge above, who eagerly wave back. Sunset hits as we head south on a run behind Whidbey Island. The Cascades and clouds turn pink as our cruise comes to an end. 

Week 5

This cruise, so far, has been quite eventful. After beginning our journey back North, we decide to turn up the Columbia River and head inland. The transition to calm water is a relief, and I am happy to have a break, however brief, from the constant rocking and rolling of the boat. A few miles upriver, we decide to lift up the boom that has been deployed over the side of the boat for a quick inspection. As the crane lifts the end of the pole up, it bends and snaps in half.

 

Either end of the boom was anchored by cables at the bow of the ship, which left the length subject to the weight of our forward momentum and the ocean’s waves, allowing it to bend like the flex of an archer’s bow as it is drawn. Over time, at the center of the pole, the aft end of a welded joint began to split, until only a sliver, about an inch long, was left holding it together. We had caught it just in time.

As a testament to the strength of the team here at UW, it takes us twelve hours to find a dock, find a welder, take the whole thing apart, fix it back up, and put it all back together. By one in the morning, the only thing stopping us from going back to sea is the tide. We wait till morning.

 

We depart the Columbia with the ebb, with the aim of surveying the river effluent as it mixes into the Pacific. As we skirt the edge of the river plume, the water changes back and forth from a muddy turquoise to a deep, clear blue. The salinity jumps between 20 to 30 parts per million, which brings the science party unbelievable excitement. They have renamed our mission “Plume Chasers” and insist that we’re the next big Discovery Channel hit. We follow its track South until all traces of the river disappear and all that’s left is endless salty blue ocean.

 

I awake the next morning to Brian knocking at my stateroom door. I hear him say “orcas” and I am up on deck before my eyes are even open. A pod of about a dozen whales rides in our wake. They surface, one or two at a time, and then all together at once. A few juveniles breach and playfully rub against the adults. Farther behind, a massive dorsal fin rises slowly from the sea and a dark body with two white eye patches emerge, pointed directly towards us. It must be the alpha male, taking up the rear of the pack. Words cannot describe the sense of wonder I feel. I have never interacted with animals this large before, and my heart jumps with waves of nerves and excitement. For a moment, I am no longer the apex predator, and I feel as if I am being preyed upon. Watching the family move with coordination and intention, it becomes clear that these animals are highly intelligent. I am completely overcome with admiration for these creatures, and I am reminded that the ocean is truly a humbling place to be.

Week 4

For the past few days, we have been working our way down the coastline, following a zig-zag pattern as we follow the current south. We cruise with ease, with the wind and waves are at our back. The days are mostly grey and smooth, with the occasional whale spout or pod of dolphins breaking up the endless ocean.

 

The group of scientists on board are studying the presence and fate of methane in our coastal waters. They extract the gas from the surface of the ocean as we cruise by, and then compress it into gas cylinders for further analysis. Methane is a greenhouse gas, with a much greater ability to retain heat than its better known cousin, carbon dioxide. This means a relatively small amount of methane may have a large affect on the global climate. This research project aims to understand the role of methane in coastal ocean processes, and then using computer modeling, project how these processes contribute to the climate on a global scale.

 

Initially, we planned to sail all the way to central California. To everyone’s dissappointment, the forecast is calling for a storm just around the corner of Cape Blanco. If we choose to continue, a nine foot swell awaits us, and we’ve already been struggling through less. With our hopes of eating chowder in the Golden State dashed, we turn tail and head North.

 

With this sudden change, we need to come up with a new game plan that fits within the limits of the weather, tide, and time. We all gather around the navigation computer, the science team points out other locations they would like to sample, shooting out new research ideas and case studies on the fly. We manage to pull together a plan that everyone seems to be happy with, and I walk away pretty amazed at everyone’s flexibility and ability to improvise on such short notice.

 

This kind of experience makes it clear that the nature of fieldwork taught in class just doesn’t reflect reality at all. I have yet to see a single research cruise where things go as planned, where scientists walk off the boat with the exact data and samples they expect. It is almost unfair to lead undergraduates on with the idea that fieldwork may be accomplished with a printed handout on a clipboard, and the option of a rain check if bad weather arises. The truth of it is that when the boat has been rolling nearly 180 degrees for three days straight, when your equipment keeps falling over no matter how many bungee cords you strap around them, when the prospects of weather gets even worse, you work through the nausea and figure out something better. The truth of it is, as Liz likes to say, research at sea is fast and loose.

Week 2

Our first cruise is a short one. Since the R/V Rachel Carson is operated by the University of Washington, a portion of the cruises are for undergraduate and graduate classes and research. This two-day cruise is a field section for a fisheries class, where students take what they have learned in lecture and have the opportunity to apply it in real life. They get to witness a fisheries boat in action, deploy and recover the nets they have heard of, and handle and identify the ocean creatures they have studied in their books. As a graduate from a college located nearly two-hundred miles from the ocean, I’ll admit, I am a little jealous.

We transit over to Shilshole, a marina at the mouth of Lake Union, to pick up the students. The lake level is kept a few feet higher than sea level by a set of watertight gates in the canal. So, I get to experience travelling through locks for the first time, which I am thrilled about, to the amusement of the crew. We arrive at Shilshole and the boat is suddenly flooded with students and instructors, outfitted in lifejackets and hardhats. We cast off and head West to the other side of Puget Sound.

The plan is to deploy an Otter Trawl across four set tracklines of varying depths to sample for abundance and variety of fish species over the course of twenty-four hours. Contrary to how it sounds, an Otter Trawl is not designed for (nor is it likely capable of) capturing otters. The unique net bears a set of doors, which were traditionally wooden, that kept the mouth of the net out and open as it dredges the bottom of the ocean floor. Old-time Bostonian fishermen butchered the word “outer” that described the purpose of the doors, and the name “otter” stuck.

Our first few attempts at setting the trawl end in a tangle, as it is our first time using this sort of net on RC. Figuring it out takes some troubleshooting and practice. With a line attached to each door, we raise the net off the deck and above our heads. As the net is cast of the back deck and into the water, we guide the top of the net as it swings 180 degrees. The winch lowers as the net begins to pull behind us. As the doors sink below the surface, the water catches them like a parachute. The mouth of the net opens and for a moment, the top line of floats raise to the surface, then the whole of it sinks into the darkness.

We tow for fifteen minutes, then winch the net back to the surface. As a biologist, I am enchanted by the strange and diverse creatures that our trawls have unearthed from the bottom of the Sound. But the ecologist in me knows that this survey is damaging to the benthal ecosystem, and I struggle with the pros and cons of this kind of experiential education. We release another netload into the sorting tables. Amidst a heap of algae and shrimp, a crusty old beer bottle rolls out, and an octopus emerges from its mouth. It has suddenly found itself in an alien world, being poked and prodded by dozens of academic fingers, surrounded by smooth blue walls and bright light. It turns white, then dark red. It darts back and forth and inks a couple of times before settling into a corner of the tank.

Operations continue throughout the night. I take rest during the third section of the cruise, but I am quickly reminded that it takes me a couple of days to acclimate to sleeping on board a moving and noisy vessel, so my sleep is brief and restless. At sunrise, I am back on deck.

 

It is Saturday, and sunrise over Seattle is gorgeous. The Olympic mountain range stands to our West. The air is cool and clear and smells of salt. Today is the first day of shrimp season, and the Sound is littered with dozens of small boats casting their pots and sitting by their buoys. In the distance, sailboats gather for a race. As we begin the final shift of our cruise, Liz gives me permission to lead the deck. The deployments and recoveries are simple enough, and it’s a good opportunity for me to get back into the swing of things and get a better feel of how operations go on a new boat. It is a good first cruise for me, and I am looking forward to all the new things that are soon to come.

 

Week 1

When I arrive in Seattle, I find the city in full bloom. It is sunny and clear and warm, the opposite of what usually comes to mind when I think of the Pacific Northwest. It seems that I am here at the best time of the year. 

I have been given directions to the dock, and a phone number to call when I get there. Liz finds me when I pull up to the gate and brings me over to the boat. Aora was initially a fishing vessel from Scotland that was refitted for research a number of years ago. When University of Washington purchased her, a donor fronted the funds on the single condition that she be renamed in honor of their favorite ecological hero. The R/V Rachel Carson is painted on the bow in large black letters, although I can still make out the name Aora above it. At 19 meters long, she is the smallest research vessel I will have been on; Liz calls her adorable

Others call her The Metric Wonder, a title that has come to describe the bane of the crews’ and techs’ existence. As a European boat, RC is outfitted with European power and hardware, rendering our knowledge and hardware incompatible. As a result, some things that should be simple become complicated: the coffee maker had to be custom ordered to fit the power supply, the crew hoard pipes from the boat for their fittings, when I ask Brian, the ship’s mate, about the foreign outlets he throws me a converter and remarks, “we’ve been giving these out like popcorn”. 

I spend most of my first week getting the lay of the land. I am quickly figuring out where things are, and who to go to when I am unable to find something. I am settling in quickly, and looking forward to being back out at sea. 

Adios San Diego, Hola Portland! What we do while in transit …

During our stop in San Diego, many things on the ship changed. We disembarked the science techs and all their gear, which I must say makes the ship look so much bigger, garnered provisions and got the ship’s winch back. The secondary marine techs were switched out and once under sail, we fired-up all that data acquiring equipment that we run and maintain as SOP (standard operating procedure). So now what? Today has been a day like any other while in transit. We made work lists and knocked out the items on the list. For example, we removed sensors from the CTD that are due for calibration, replacing them with ones from the ship stores, ordering replacements for the store from shore to be brought with the oncoming tech and updating all the logs that pertain to that activity. We trained on CTD terminations, so in the event there is a problem during operations, we will be prepared to make that happen efficiently. We spend our day ensuring that all the details that make operations efficient and smooth are addressed before the heat is turned up. We prepare. We anticipate. We pay close attention to the details, so the details don’t come back to haunt us at a critical moment. In addition, as we are headed for dry dock we have to coordinate with the engineers that power requirements are meet as we have certain equipment that needs to remain online no matter what state the ship is in. And, for me personally, it’s time to start tidying up my internship and personal details, like this final blog and laundry. The party’s over, so turn the lights out. Adios, Thomas G. Thompson.

Reflections

Since joining the vessel, I have learned how to cast a CTD, deploy ARGO floats and drifters, and what the processes entail to launch and recover TAO buoys; and those lessons, were mostly closely associated with the maintenance aspects specific to this expedition. However, those maintenance tasks were the easier part for me to absorb as I am not a novice sailor, nor do I lack mechanical skills. I also learned a lot about how to operate a plethora of electronic equipment that allows us to collect meteorological and oceanographic data; these are the ones I feared the most and all the while being fully aware that these are the bread and butter of a marine tech’s job description. Working as a marine tech is a lot as I anticipated and really stretched the limits of my knowledge base. See, the one aspect of the internship that gave me the most cause for pause, even while I was applying for the position, was knowing that the depth of my computer skills would be my Achilles; and, it has been. Yet, I have strengthened that weak spot and overcome some of the hesitation that is hallmark to such inadequacies. The picture I’ve chosen to accompany this article is a collage of all the different equipment that minimally, I have learned how to operate and maintain, and some, I have even learned how to troubleshoot and repair. From the multibeam that sends signals to the ocean floor for mapping, to maintaining our internet for communications to shore, which is so important professionally (and for a happy crew), to the SCS (Scientific Computer Systems) which monitors and logs no less than 168 sensors (at the moment), I can walk into the computer lab, and know when something is amiss, what that something is, why and how it is monitoring, how critical it is to operations and sometimes, EXACTLY what to do to fix it! Take that Achilles!

Best laid plans …

The dynamic fashion of the marine environment makes the idea of placing something like a grid (or a buoy) in a spot and expecting it to be there the next day, let alone a year later, a special task. The buoy, or what’s left of it in the photo, is just one of the issues we encountered that caused our route and plan to be adjusted.  We had set this buoy and did the obligatory checks to ensure it was functioning properly before moving on to out next destination, just to be recalled to it within a day; we had lost all transmissions. In route to another maintenance recovery, we were informed just about a day before scheduled arrival that the buoy had moved 12nmi before losing contact; we didn’t find that one. Add to the fluid nature of the ocean, the corrosive environment and punishing ultra-violence of the sun, it’s little wonder that buoys have been such a reliable source for data at all. For instance, we’ve had to cut the mooring line twice now as the release mechanism did not respond properly to the release code, yet we recovered the buoys and most of the moorings. We cannot say with any certainty why the mechanisms did not release as average depth for these two devices hover around 3500m. The ocean is a world filled with hazards and unknowns. In spite of all these variables and possible derailments, the science team, through triangulation, determined that the last two buoys were located within 3m and 1m respectively of their designated stations, and we have managed to stay on schedule, pretty impressive. I believe these accomplishments speak volumes about the entire team’s ability to communicate, prioritize and function as a unit to fulfill our best laid plan.

Maintenance, Sampling and Catching (because anyone can fish)

While in transit, my mentor has shown me the ropes (no pun intended). The list of responsibilities of a marine technician seem as long as the day, but to button hole the job description, I would say, marine techs are here to serve the mission, which includes the needs of the many as well as the few, professional and personal. In addition, one tries to throw in whenever and wherever possible to get the job done. In general, we are the keeper of data, the link in communication and the glue that holds all the parts as a whole (next to the steward, of course, the food has been AMAZING!). Casting CTD’s has become mostly a night time event as the TAO buoys have to be done in the light of day. The CTD’s can acquire much more than just conductivity, temperature and depth; in fact, they can be outfitted with various sensors or equipment to measure or sample just about any parameter that the science crew requires. The one in the picture is loaded with this vessel’s standard equipment, which includes 24 bottles to sample water and oxygen sensors. Oh, and the catching? When we pull a buoy out the fish follow, and we get out the mitts because they practically jump on the deck! Fresh and local fish are a staple on this ship!

Page 5 of 7

Powered by WordPress & Theme by Anders Norén