Category: University of Miami/RSMAS Page 7 of 9

Week 5: Changing out an Antenna

We got an early start on monday to get ready to head up the Miami river to a shipyard where we could have our antenna switched out. We loaded the new antenna onto the ship with one of our cranes. Once we had everything loaded we made our way to the river. We had to cross under 6 different draw bridges along our way. Once we made it to the ship yard I helped prep the new antenna and decommission the old one. We then had a crane come and swap the two antennas. I helped secure the new antenna to its platform. We then headed back down the river and to port. The rest of the week we worked more on general maintenance of the ship. We filled our water tanks. We also topped off our diesel tanks with 2,000 gallons of fuel.

Week 4: On the Walton smith

We spent the week at the dock taking care of daily maintenance as well as continuing with our list of repairs. On top of that I also had the oprtunity to reassemble a CTD.

Every year the CTD’s are sent out to be recalibrated. They are taken apart and all the different instruments are sent out separately. Once they are calibrated they are sent back to us and we reassemble the CTD. It was a great experience to learn where all the parts go and what each part actually does. I now have a much better idea how the CTD operates. 

One recurring task we have been doing frequently is cleaning out the sea strainer for our air conditioners. Normally the strainer might need to be cleaned once a week but because we have been so close to shore and there is a higher amount of seaweed in the water we have been needing to do it daily. So i’m getting pretty good at that. 

This week I have been spending most of my time tracing and fixing freshwater leakes. Two of the leaks were from condensation that accumulated in the air conditioners. But one took a while to figure out. A puddle kept forming in a corner of one of the cabins every couple of hours. We had to cut out some of the walls to figure out where it was coming from. Eventually we figured out one of the water connections for an ice maker in another room. The water was dripping and then running along the inside of the wall all the way to the other cabin. We were able to just tighten a hose clamp on it and it fixed the problem, but now i’ll have to spend the rest of the week putting the walls back together.

Week 3: Preparing For Haul Out

This week we spent our time back at the dock so we did a lot more work to the ship. We are replacing one of our large antennas in a week. I did a bit of work getting everything set up for the removal and for the installation of the new Antenna. I ran new cables throughout the ship and also made sure none of the bolts holding down the Antenna were seized. We are also going to have the entire ship hauled out to be inspected and repaired in April. So we started to prepare for that as well. We scuba dived under the ship to measure the cutless bearings around the prop shaft to see if they needed to be replaced, which we found they will be. So now we can have the new bearings made, which will take about 2 weeks and should be ready by the time the ship is taken out of the water for the inspection.  While we were diving we also inspected a large transducer window under the hull to make sure there were no cracks. Not only was the dive important for our work but it was a lot of fun! There were lots of really cool fish and rays under the ship.

Week 2: First time out

We spent the week getting ready to take a group of students and professors out. We finished up all the projects we had been working on. We got the CTD prepped on Thursday. Then did a wet test on friday. It was my first time deploying the CTD. It went pretty smoothly, and was great practice for when we would do it for real. While we were doing our prep I got to see a few manatees. They like to spend time in the area we are docked.

We started around 8am Saturday morning. I helped the engineer get the engine fired up. We also setup the generators and took out the shore power. We went about 8 miles offshore, and dropped the CTD in to get some samples. The seas were pretty rough, but it still went really well. We ended up doing 2 different CTD deployments throughout the day. We also deployed two different nets to collect micro plastics and we dragged another to collect plankton. After we finished collecting the samples we headed back to port. On the way we saw a pod of dolphins ride the bow wake. We will do another similar trip Sunday as well.

Week 1: Arrived at the Walton Smith

I arrived at the F.G. Walton Smith on Tuesday afternoon. I was introduced to the captain and some of the crew. I was able to explore the ship and the Rosenstiel Campus but that’s about all I had time for that night. The vessel is a 96 foot Catamaran. It has a 7 foot draft which makes it great for accessing shallow waters. 

These first few days we have just been at the dock doing work on the ship. I have been working with Dennis who is the marine tec. There is not a lot of work to be done on the equipment at the moment so I have been helping set up and replace the old ethernet cables for the ship’s computers. When I’m not working with dennis I have been working with the ships engineer. While we are at the dock there is a lot of work that needs to be done in the engineering department. We have done electrical work, kept up with the daily maintenance checklist, worked on the exhaust system, made laminate panels, replaced a faucet and worked on the air conditioning system. 

So far my experience since arriving has been great. I have already been learning a lot about the ship and how it operates. Everyone has been very helpful and welcoming. I’m excited for what’s to come.

Pre-Cruise Introduction

Hello, 

My name is Jonathan Raymond. I will be joining the crew of the F.G. Walton Smith out of the Rosenstiel School in Miami on February 18th. I’m originally from New Hampshire. While I have a bachelor’s degree in anthropology, I have always had an interest in boats and fixing things. This interest led me to enroll in the Marine Systems Program at IYRS School of Technology and Trades in Newport, RI where I have been living the last 6 months. I’m very excited to start my internship and gain more experience running and maintaining research equipment out in the field.

 

Week 3 Aboard the Walton Smith: Everglades, waterways, and CTDs

A new cruise is underway and we were loaded up and off the docks by 7:00 am. This week we are back to CTD measurements, but this time we are doing shallow water deployments down along the Florida Keys and in the Gulf. The objective of this cruise was to characterize changes in water quality and conditions along the Everglades outlets by measuring oxygen content, salinity, temperature, and collecting planktonic samples for later processing. The majority of data collection was gathered from flow through surface measurements. We spent our first day sailing down the keys and occasionally deploying the CTD. However, we quickly found out that the altimeter mounted on the CTD was faulty and was off by 10 meters, which we unfortunately discovered when the CTD hit bottom. Once we recovered the CTD we visually inspected the sensors for damage and flushed them out with fresh water. Luckily, it looked like we pulled the CTD off the bottom fast enough to prevent any damage.

The treat of the day was getting to release a tiny baby loggerhead turtle into the wild for the Seaquarium. We waited until we were in relatively shallow waters and around a decent seaweed trail and gingerly lowered the little guy into the water. We all watched as the tiny turtle swam away quickly disappeared into a little pile of sargassum.  

 

Since a significant amount of data was being collected from surface flow, I got an opportunity to learn to troubleshoot the salt-water intake. We observed a drop in the intake on the computer display and went down into the bow to shut off the intake for a couple minutes. Since we were sampling so close to shore, debris, sargassum, and seagrass can often clog the intake valve, so simply turning off the suction should clear the intake, and indeed it did. We also had some slightly rougher weather, which complicated CTD deployment and recovery. We had to set up a cleat on the back deck and run a tag line through it. Once we did that it was much easier and safer to control the wildly swinging CTD as we tried to drag it back on board.

The week seemed to fly by in a series of rapid-fire CTD deployments interspersed with flow-through measurements. The majority of stations were no deeper than 10 meters so the CTD measurements never took long.

We did have a bit of good luck while out by Shark River on the southern coast of Florida as several dolphins started following the boat around. Crew and scientists alike crowded to the back deck to watch the dolphins play in the wake of the boat. It was a great experience and very fun to watch. Eventually the dolphins got distracted by something more entertaining and were off to other endeavors, and the crew and scientists followed in suit.

On the longer transits between station, Don took some time to walk me through the Seabird software and the sensor outputs, teaching me the electronic side of CTD deployment and data collection. It was fascinating to see the real-time data outputs and the ease with which the software allowed us to trigger the Niskin bottes for water sampling.

 

We also got our first swim call on this cruise when we found ourselves in calm waters near shore. Since we had to take out the dingy to ensure it was still fully operational, I got a quick ride out around the boat and manage to get a great picture of the Walton Smith out on the water before joining the rest of the scientists on the refreshing and much needed swim call. 

The technical highlight of this trip was that, after assisting with several CTD deployments, I was allowed to run the deck and, under Don’s supervision, I was in charge of deploying and recovering the CTD. I learned all the hand signals to direct the crane operator, the safety measures taken to ensure none of the equipment was damaged, and how important communication is for successful deployment and recovery. I felt like a true marine technician.

On the last couple of days of the cruise I took the opportunity to hone my skills with the CTD. Don walked me through all the sensors again and the expected outputs. We also tried to fix the altimeter but to no avail. While waiting to arrive at each of the final CTD stations I helped the engineers on board check and perform some maintenance on the ship’s air conditioners. I also had the opportunity to speak with the scientists onboard about their projects, which ranged from physical oceanography and marine biology.

 

Once we were done with the CTD stations and making our way back up the Florida coast, I spent some time up on the bridge where I got my final lesson on knots. I learned several ornamental knots, such as the Turks Head know and Carrick Bend. I also helped the first mate make new mooring lines for the ship, which turned out to be a great opportunity to learn the eye splice.

We made it back to the docks that afternoon and as we helped the scientists unload all their gear I was hit with a bittersweet sensation. That had been my last time out at sea, perhaps for a while, and I will truly miss the sensation of a swaying boat at sea. The internship was an invaluable experience full of lessons learned, skills acquired and amazing characters met, all of which will not soon be forgotten.

Week 2 Aboard the Walton Smith: Tucker Trawls, Shrimp, and Bioluminescence

One week down and two to go. This week we set off on a five-day cruise to collect deep-sea, pelagic zooplankton using a tucker trawl. A group of about 10 graduate students and professors from three different universities came on board and brought along a fully stocked field lab. We spent Monday loading up the gear, setting up the tucker trawl and planning the deployment schedule. I worked with Denis to securely fasten the CTD to the tucker trawl frame, a complicated task as the CTD would be dragged through tons of water for several hours. With the help of several bolts, screws, washers, electrical tape and countless zip ties, Denis and I were finally satisfied that every wire, connector and plug was securely fastened. 

 

Our first deployment was early the next morning. I groggily climbed out of bed at 4:00 am and made my way to the deck, where scientists and marine techs alike were congregating in preparation for our first deployment. We all worked together to make sure the Tucker Trawl was properly assembled, the CTD and release timer securely fastened, and the net untangled and ready to deploy. Finally, we were ready to toss it into the water. Using the hydraulic crane and several lines, we slowly lifted the frame off the deck, lowered the collection tube into the water and swung the frame off the deck. The last step was to pull the securing line which release a set of cables and opened the net as it sunk into the depths of the ocean. The trawl was going to be dragged along behind the boat for six hours between 500 and 700 meters. As the cruise was accommodating three separate projects, the scientists on board were hoping for an eclectic sample of zooplankton and pelagic, deep-sea organisms. Primarily, the projects involved collecting various species of bioluminescent shrimp so as to dissect and analyze the bioluminescent component of their physiology.

While we waited for the trawl, I was enlisted to assist with the cleaning and waxing of the awnings on the top deck, a tedious but necessary task for the proper maintenance of the boat. The first mate then requested my help to organize the navigation charts, which was the perfect opportunity to learn a bit more about the different kinds of charts and how to read them.

At last, the six hour trawl was complete and the net was dragged back on board and greeted by an enthusiastic swarm of scientists, all eager to see what treasures the extensive trawl had gathered. I can honestly say the crew of scientists was not disappointed as they dragged bucket after bucket of a thick soup of organisms and seaweed into the lab. The next few hours were spent sorting the shrimp, fish, and other invertebrates into neat groups by species, and often, subspecies. They were kind enough to tolerate me as I excitedly buzzed around the lab asking several questions about the nature of bioluminescence, its purpose and the underlying physiology. I even got to observe larval shrimp under a microscope as a professor enthusiastically explained the nature of a double retina in the developing shrimp. Much to my delight, the trawl had also gathered several types of bycatch, many of which were adorable, miniature versions of marine animals. My favorites were the tiny, larval squid and on occasion, the smallest larval crab I have ever seen. Luckily, I was surrounded by a group of biologists that were all eager enough to teach me about the nature of these fascinating deep-sea organisms and their unique biological adaptations.

And so the cruise continued as we tossed the trawl back in the water and waited with baited breath for the next haul of organisms.

 

After deploying the trawl three times throughout the day and night, we came across our first technical problem. The timed release mechanism that was mounted on the frame of the tucker trawl and provided the crucial function of sealing the collection chamber at the end of the net and protecting sensitive bioluminescent organisms from excessive exposure to sunlight stopped working. It turns out that water got into the previously watertight chamber that housed the batteries and electrical trigger mechanisms and fried the entire system. Luckily, we have highly qualified and capable engineers and marine techs on board that were happy to attempt to fix the problem. We took the trigger mechanism apart, piece-by-piece, and replaced the corroded battery circuit with a new one. I had an opportunity to hone my wire stripping, crimping, and replacing skills as we rebuilt the mechanism.

 

After waiting a few hours for the silicon holding the circuit in place to set we finally got a chance to test it out. Unfortunately, despite our optimism, it did not work. It looked like the engine in the trigger mechanism itself was damaged so we decided to replace the entire engine, which of course meant undoing all our previous work. But, step-by-step, we took the machine apart and replaced the centrally located engine. After several cut and crimped wires and even threading new holes for the screws (we think there was a manufacturing error where the bolt holes on top of the casing for the engine had no threading) the trigger mechanism was finally fully rebuilt and once again we waited with bated breath to see if our efforts would pay off. Thankfully, it turned out that the engine was once again fully operational, much to our and the scientists delight.

 Much like the days before, the rest of the week involved a series of trawl deployments, monitoring, and recovering. However, on Thursday, the scientists on board allowed me to assist with the sorting of the organisms they collected. They gave me a pair of forceps and a tray of deep-water pelagic organisms and patiently taught me to distinguish between several fish, shrimp, and other amphipods. I spent the day working the trawl and picking through marine organisms, sargassum and debris. The experience was fascinating as I got to observe several deep-sea organisms that few people get to witness in person.

 

Our final day had a very early morning start that resulted in a pleasant surprise. I joined the scientists in the dark room on their last trawl collection and was delighted to sea the Acanthephyra purpurea, a fascinating shrimp that spews a cloud of bright blue bioluminescence to distract predators, and we were even lucky enough to see it spit out a beautiful bioluminescent cloud. I also got to se several luminescent copapods, pyrosomes, and jellyfish. It was an awe-inspiring experience to see so many deep-sea and elusive organisms up close and personal.

The rest of the day was spent honing my amphipod sorting skills and learning about several new animals, including my new favorite, the phronima, a tiny parasitoid that lives inside a hollowed out salp and supposedly inspired “alien” from the movie by the same name. The cruise was an incredibly mix of technical skills and biological research and was a incomparable learning opportunity that I took full advantage of. A cruise I will certainly not forget any time soon.

Week 1 Aboard the Walton Smith: Knots, Navigation, and CTDs

After making the trek from Nicaragua to Miami I finally arrived at the F.G Walton Smith, a ship that fully lived up to its expectations. Arrival was followed by a whirlwind tour of the boat and a speedy introduction to the crew. Denis, the marine technician on board and an individual who clearly loves what he does, was eager to show me all the tech on board. Within my first hour on the boat I was already learning about the different kinds of servers, connecters and circuits that keep the ship running and reliable.

By the second day on the Walton Smith it already felt like home. An early morning breakfast was followed by a new lesson, this time about the engine room and the ship’s communication methods. A tour of the engine room revealed the complexity of the ship’s inner workings. Huge rotating gears connected to metal casings that house the very guts of the ship fill the engine rooms and intimidate any aspiring engineer. Since the engines seemed to be fully functional and smoothly operating I turned to a new task. The horn on the aft deck was heavily corroded and barely functional so I was given the task of replacing it with a new one. Thus I received my first hands-on lesson on wire stripping, threading and replacing. And so, step by step, I removed the old horn, wires and all, and replaced it with a shiny new one.

Our first cruise was a short one, only two days long, and had the objective of assisting NOAA with a long-term project monitoring and collecting CTD data along a transect of the Gulf Stream off the coast of Florida. On Thursday morning, the ship was fully loaded with equipment and off the docks and into open water by 6:00 am and within a couple hours we were surrounded by nothing but beautiful, deep-blue sea. Since it took several hours to arrive at the first station, where we would be deploying the CTD, I spent the day in the bridge with the captain and second mate where I learned everything from knot tying to celestial navigation. The knots started off easy with a granny knot, but I quickly worked my way up to the significantly more complex Spanish bowline knot. We then moved on to learning about the mechanics of steering a ship, covering everything from pitch directionality to throttle and speed. Finally, we moved onto celestial navigation where I learned the difference between variation and deviation and how to spin a compass to determine the degree of deviation due to the mechanical components aboard the ship. Scrutinizing navigation maps led to celestial navigation and the applications of a sextant. With a huge assortment of eclectic information swirling in my head, I was happy to spend a few hours relaxing on the bow and watching the boat gently sway about on the ocean swells.

After several hours navigating along the Florida coast, we finally arrived at our first station where the NOAA team planned to deploy the CTD. I watched as the CTD was slowly lowered with the hydraulic crane into 600 meters of water. Once at the bottom of the water column, the CTD was slowly pulled through the water, stopping at periodic intervals to collect water samples using a trigger mechanism connected to the fiber optic cable found within the cable used to hoist the CTD. As the massive contraption was dragged through the water column it also collected and transmitted real time conductivity, temperature, and depth readings, which the NOAA scientists eagerly monitored on a screen in the dry lab.

Once the CTD was back on the deck, water samples were partitioned into oxygen content readings, organic compound samples, and salinity samples, all of which were carefully collected, processed, and stored away for future analysis. Since there wasn’t much to do in the way of mechanics or engineering, my role was to assist in the collection and processing of the oxygen content samples, which primarily involved carefully filling bottles with aliquots of water samples and adding two compounds that helped quantify oxygen content.

The NOAA crew was also working on deploying a series of three different drifters; floating computers that use satellite GPS systems to track current speed and directionality. In this case, they were not only testing the efficiency of three different styles of drifters, but also collecting data on the Gulf Stream to assist in calibrating measurements obtained from a submerged telephone cable that measures current flow and speed by recording fluctuations in electromagnetic currents as currents pass over the wire. The team was only too happy to let me assist in throwing the massive computers off the deck and into the Gulf Stream, where we watched them float away with surprising velocity. We started deploying the CTD and the drifters around 6:00 in the afternoon and were not done until about 7:00 the next morning. It was a long and exhausting night, but one full of learning opportunities and unforgettable experiences.

 

 

Week 4 on the F. G. Walton Smith

This was my final week for the internship. It started off with a conclusion to the EPA research cruise. The EPA was gathering sediment samples from two different dredge spoil sites. They also dived near one them. The cruise ended early because off their success with gathering sediment samples. Normally, they have a bit of trouble gathering them because the sample has to meet strict requirements, such as the following: the sample cannot show signs off overflowing or any bit being lost upon recovery, there needs to be a sediment-water interface, and the grab must have closed properly and completely.

While the EPA was busy sampling and we were going to different sites, I assisted the 2nd mate in trouble-shooting the problem with one of the speakers. The speaker had not worked in about a year. I installed a new switch button for the speaker and was about to wire a new speaker when I noticed the wire looked eroded. I tried to strip it back to see if there was a cleaner part, but it looked the same. I installed the speaker despite this. The speaker was a two-way speaker. I then spent a couple of days trouble-shooting this new speaker. The problem with it was that it only worked one way instead of both – my thought was that some of the wires were too eroded.

On the last day of the cruise, I helped take the small boat out to a dive site. I was acting as the dive tender, which keeps an eye on the divers and records information about pressure and depth. Unfortunately, after some time on the small boat I got a little sea sick. This was the first time and last time that cruise that I had gotten sea sick.

On Tuesday night, the 11th at about 2100, we made it back to the dock and the cruise was over. I spent the next couple of days doing maintenance on the boat and some of the scientific gear. I helped clean the CTD, the SBE45 (underway system) Thermosalinograph’s sensors, the galley and its stores, and helped power wash the algae off the side of the vessel.

I am very grateful for this experience. I enjoyed my time in the Walton Smith and I learned a lot about the job of a marine technician. I also learned about areas where I need further practice and experience. Dennis, the marine technician, was great and I really enjoyed learning from. He would explain something to me, maybe show an example, and then send me off to fix something or accomplish a task.

The rest of the crew was also very kind and helpful to me. I cannot thank you all enough!

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